STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_0865Hypothetical protein. (537 aa)    
Predicted Functional Partners:
Dsui_3516
Hypothetical protein.
  
     0.774
Dsui_1237
Hypothetical protein.
  
     0.769
Dsui_0658
Chemotaxis signal transduction protein; PFAM: CheW-like domain.
  
     0.720
Dsui_1391
Hypothetical protein.
  
     0.695
Dsui_0582
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: STAS domain.
  
     0.693
Dsui_3196
TIGRFAM: FimV C-terminal domain; FimV N-terminal domain.
  
     0.687
Dsui_1055
PFAM: Sporulation related domain.
  
     0.682
Dsui_2222
Type II secretory pathway, component PulD; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
     0.674
Dsui_0656
Chemotaxis protein histidine kinase-like protein; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain.
  
     0.654
Dsui_1575
Hypothetical protein.
  
     0.634
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.