STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_1098Hypothetical protein. (237 aa)    
Predicted Functional Partners:
Dsui_3306
Hypothetical protein.
  
   
 0.747
Dsui_1638
PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain.
  
     0.739
Dsui_2077
cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain.
 
  
 0.712
Dsui_1237
Hypothetical protein.
  
     0.708
Dsui_2647
Subtilisin-like serine protease; PFAM: Subtilase family.
 
     0.703
Dsui_2626
PFAM: Plasmid replication region DNA-binding N-term.
  
    0.673
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
       0.668
Dsui_1096
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
       0.664
Dsui_2646
PFAM: ATPase family associated with various cellular activities (AAA); manually curated.
 
     0.663
Dsui_1100
Hypothetical protein.
       0.659
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.