STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_1828Response regulator with putative antiterminator output domain; PFAM: Response regulator receiver domain; ANTAR domain. (191 aa)    
Predicted Functional Partners:
Dsui_1825
NAD(P)H-dependent nitrite reductase, large subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit.
 
  
 0.882
Dsui_1826
PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit.
 
  
 0.880
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.807
Dsui_1831
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
 
  
 0.804
Dsui_1817
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.746
Dsui_1827
Hypothetical protein; PFAM: CbiX.
       0.713
Dsui_1943
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.608
atpD
ATP synthase, F1 beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
    0.556
Dsui_1829
PFAM: Hemerythrin HHE cation binding domain.
       0.499
Dsui_1579
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
 
 0.492
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.