STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_2122ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like. (348 aa)    
Predicted Functional Partners:
Dsui_2121
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.964
Dsui_2120
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.952
Dsui_3463
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
  
 0.843
Dsui_1832
Nitrate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein.
 
  
 0.831
Dsui_3464
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.799
Dsui_1833
PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D.
 
  
 0.794
Dsui_2118
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; PFAM: Coenzyme A transferase.
 
     0.773
Dsui_2119
Uncharacterized protein SCO1/SenC/PrrC; PFAM: SCO1/SenC.
       0.652
Dsui_2117
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; PFAM: Coenzyme A transferase.
 
     0.603
Dsui_3462
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: NMT1/THI5 like.
  
     0.525
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.