STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_2525PFAM: Phage derived protein Gp49-like (DUF891). (125 aa)    
Predicted Functional Partners:
Dsui_2524
Putative conserved small protein; PFAM: Helix-turn-helix.
 
  
 0.966
Dsui_2043
Cysteine synthase; PFAM: CBS domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase.
  
 
 0.846
Dsui_2523
Hypothetical protein.
       0.630
Dsui_2527
Transposase, TnpA family; PFAM: Transposase.
       0.503
Dsui_2526
Site-specific recombinase, DNA invertase Pin; PFAM: Resolvase, N terminal domain.
       0.499
Dsui_2528
Putative signal transduction protein; PFAM: Protein kinase domain; HDOD domain.
       0.499
Dsui_1483
Putative transcription regulator containing HTH domain; PFAM: Domain of unknown function (DUF955).
 
     0.498
Dsui_1482
PFAM: Uncharacterized protein conserved in bacteria (DUF2136).
  
     0.428
Dsui_1481
Hypothetical protein.
  
     0.426
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.