STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_3103Putative signal transduction protein containing EAL and modified HD-GYP domains; PFAM: EAL domain; HDOD domain. (399 aa)    
Predicted Functional Partners:
Dsui_3104
PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
     
 0.738
Dsui_3071
PFAM: SprA-related family.
  
     0.492
Dsui_1740
Flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ.
 
     0.471
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.464
Dsui_1741
Flagellar hook-associated protein FlgK; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
     0.436
Dsui_1717
Chemotaxis signal transduction protein; PFAM: CheW-like domain; Response regulator receiver domain.
 
     0.420
Dsui_2414
Hypothetical protein.
  
     0.407
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.