STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dsui_3412Putative signal transduction protein; PFAM: HDOD domain. (298 aa)    
Predicted Functional Partners:
Dsui_3414
FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain.
       0.779
Dsui_3413
Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
       0.776
Dsui_3415
FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
       0.773
Dsui_3416
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
       0.773
Dsui_2174
Putative signal transduction protein; PFAM: HDOD domain.
  
     0.765
Dsui_3418
Putative permease; PFAM: Sulfite exporter TauE/SafE.
       0.607
Dsui_3417
Hypothetical protein.
       0.603
Dsui_3411
Hypothetical protein.
       0.601
Dsui_3410
PFAM: Protein phosphatase 2C.
       0.549
Dsui_0845
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
  
     0.546
Your Current Organism:
Azospira oryzae
NCBI taxonomy Id: 640081
Other names: A. oryzae PS, Azospira oryzae PS, Dechlorosoma suillum PS, Dechlorosoma suillum str. PS, Dechlorosoma suillum strain PS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.