STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_0042KEGG: amc:MADE_02010 23S rRNA m(2)G2445 methyltransferase. (66 aa)    
Predicted Functional Partners:
Srot_0037
Hypothetical protein; KEGG: mrd:Mrad2831_2107 two-component VirA-like sensor kinase.
       0.773
Srot_0038
KEGG: ckp:ckrop_3006 hypothetical protein.
       0.773
Srot_0039
KEGG: kra:Krad_1758 hypothetical protein.
       0.773
Srot_0040
KEGG: nfa:nfa220 hypothetical protein.
       0.773
Srot_0041
KEGG: saq:Sare_3778 hypothetical protein.
       0.773
Srot_0043
KEGG: tmz:Tmz1t_3243 heavy metal translocating P- type ATPase.
       0.773
Srot_0044
KEGG: bln:Blon_1294 hypothetical protein.
       0.773
Srot_0045
Hypothetical protein; KEGG: seu:SEQ_0231 Mga-like regulatory protein.
       0.773
Srot_0046
KEGG: mjl:Mjls_2273 hypothetical protein.
       0.686
Srot_0047
Hypothetical protein; KEGG: sgr:SGR_1817 putative phosphotransferase.
       0.686
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.