STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_0055Hypothetical protein; KEGG: mxa:MXAN_6962 methyl-accepting chemotaxis protein. (106 aa)    
Predicted Functional Partners:
Srot_0053
PFAM: protein of unknown function DUF1023; KEGG: rop:ROP_19500 hypothetical protein.
       0.773
Srot_0054
KEGG: mul:MUL_2139 lipoprotein LppV.
       0.773
Srot_0046
KEGG: mjl:Mjls_2273 hypothetical protein.
       0.476
Srot_0047
Hypothetical protein; KEGG: sgr:SGR_1817 putative phosphotransferase.
       0.476
Srot_0048
KEGG: mva:Mvan_3957 hypothetical protein.
       0.476
Srot_0049
KEGG: ami:Amir_5773 hypothetical protein.
       0.476
Srot_0050
KEGG: ade:Adeh_1911 hypothetical protein.
       0.476
Srot_0051
Hypothetical protein; KEGG: pst:PSPTO_1714 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase.
       0.476
Srot_0052
KEGG: lsp:Bsph_1148 hypothetical protein.
       0.476
Srot_0056
Hypothetical protein; KEGG: aau:AAur_0477 putative choline/carnitine/betaine transporter.
       0.437
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.