STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_0082KEGG: SORBIDRAFT_07g002060; hypothetical protein. (118 aa)    
Predicted Functional Partners:
Srot_0081
KEGG: rha:RHA1_ro08409 glycosyl hydrolase; PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup.
       0.773
Srot_0074
KEGG: ckp:ckrop_1599 hypothetical protein.
       0.581
Srot_0075
KEGG: ami:Amir_3249 hypothetical protein.
       0.581
Srot_0076
KEGG: mab:MAB_1797 bacteriophage protein.
       0.581
Srot_0077
KEGG: mab:MAB_1798 bacteriophage protein.
       0.581
Srot_0078
Hypothetical protein; KEGG: bpi:BPLAN_456 DNA-directed RNA polymerase beta subunit.
       0.581
Srot_0079
KEGG: mab:MAB_1800 bacteriophage minor tail subunit.
       0.581
Srot_0080
KEGG: hypothetical protein.
       0.581
Srot_0072
Hypothetical protein; KEGG: spm:spyM18_1465 putative structural phage protein.
       0.577
Srot_0073
Hypothetical protein; KEGG: similar to armadillo repeat containing 9.
       0.577
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.