STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_0133KEGG: mab:MAB_4224 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine- protein kinase, subgroup, catalytic domain. (724 aa)    
Predicted Functional Partners:
Srot_2272
FHA domain containing protein; KEGG: mav:MAV_2888 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.999
Srot_0135
KEGG: rha:RHA1_ro02193 hypothetical protein.
 
  
 0.970
Srot_0134
Extracellular solute-binding protein family 3; KEGG: rha:RHA1_ro02194 amino acid ABC transporter ATP-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
  
 0.963
Srot_1932
KEGG: gbr:Gbro_4263 serine/threonine protein kinase- related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase.
  
   
 0.820
Srot_0375
PFAM: Protein phosphatase 2C-like; KEGG: rop:ROP_35150 serine/threonine protein phosphatase PstP; SMART: protein phosphatase 2C domain protein.
 
 
 0.805
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
   
  
 0.780
Srot_0372
KEGG: nfa:nfa800 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine- protein kinase, subgroup, catalytic domain; PASTA domain containing protein.
 
 
0.729
Srot_0376
FHA domain containing protein; KEGG: nfa:nfa850 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
   
 
 0.659
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.615
Srot_0377
KEGG: saq:Sare_0047 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.613
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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