STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_0366KEGG: mva:Mvan_0739 putative monovalent cation/H+ antiporter subunit G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit. (103 aa)    
Predicted Functional Partners:
Srot_0367
KEGG: mab:MAB_0632c putative monovalent cation/H+ antiporter subunit F.
 
 
 0.999
Srot_0368
KEGG: gbr:Gbro_0668 cation antiporter.
 
 
 0.999
Srot_0369
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mgi:Mflv_0164 putative monovalent cation/H+ antiporter subunit D.
 
 
 0.999
Srot_0371
PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: rha:RHA1_ro02165 putative monovalent cation/H+ antiporter subunit A.
 
 
 0.999
Srot_0370
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: nfa:nfa52910 putative monovalent cation/H+ antiporter subunit C.
 
 
 0.998
Srot_0373
PFAM: penicillin-binding protein transpeptidase; KEGG: mgi:Mflv_0810 penicillin-binding protein, transpeptidase.
  
    0.674
Srot_0375
PFAM: Protein phosphatase 2C-like; KEGG: rop:ROP_35150 serine/threonine protein phosphatase PstP; SMART: protein phosphatase 2C domain protein.
     
 0.672
Srot_0372
KEGG: nfa:nfa800 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine- protein kinase, subgroup, catalytic domain; PASTA domain containing protein.
       0.671
Srot_0374
PFAM: cell cycle protein; KEGG: rop:ROP_35140 putative cell division protein RodA; Belongs to the SEDS family.
       0.671
Srot_0364
KEGG: nfa:nfa21480 putative ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
    0.600
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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