STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_0645Hypothetical protein; KEGG: smu:SMU.980 putative PTS system, beta- glucoside-specific EII component. (92 aa)    
Predicted Functional Partners:
Srot_0642
Hypothetical protein; KEGG: ach:Achl_2269 histidine kinase.
       0.773
Srot_0643
Hypothetical protein; KEGG: bpt:Bpet2935 putative transmembrane efflux protein.
      
0.773
Srot_0644
Hypothetical protein; KEGG: lme:LEUM_0911 major facilitator superfamily permease.
       0.773
Srot_0646
KEGG: mva:Mvan_0088 hypothetical protein.
       0.773
Srot_0641
KEGG: ter:Tery_4454 hypothetical protein.
       0.746
Srot_0640
KEGG: ach:Achl_4344 hypothetical protein.
       0.467
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.