STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_1074KEGG: rha:RHA1_ro01108 hypothetical protein. (576 aa)    
Predicted Functional Partners:
Srot_0991
KEGG: mgi:Mflv_4218 hypothetical protein.
  
     0.722
Srot_1091
KEGG: mmi:MMAR_4354 hypothetical protein.
  
     0.685
Srot_0631
KEGG: rop:ROP_63790 hypothetical protein.
 
     0.680
Srot_1073
PFAM: Polyprenyl synthetase; KEGG: rop:ROP_08340 geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.668
Srot_1066
KEGG: rha:RHA1_ro01120 hypothetical protein.
  
     0.652
Srot_0505
KEGG: nfa:nfa49500 hypothetical protein.
  
     0.649
Srot_2831
Hypothetical protein; KEGG: svi:Svir_39100 GTPase of unknown function.
  
     0.643
Srot_0210
KEGG: rha:RHA1_ro06355 hypothetical protein.
  
     0.642
Srot_1009
KEGG: rop:ROP_10160 hypothetical protein.
  
     0.628
Srot_1537
KEGG: mpa:MAP2418 hypothetical protein.
  
     0.615
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.