STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_1189KEGG: hypothetical protein. (142 aa)    
Predicted Functional Partners:
Srot_1186
KEGG: cak:Caul_4227 hypothetical protein.
       0.550
Srot_1187
KEGG: mlu:Mlut_00240 ParB-like nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease.
       0.550
Srot_1188
Helix-turn-helix domain protein; KEGG: wol:WD0255 transcriptional regulator, putative; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.550
Srot_1190
Hypothetical protein; KEGG: bpm:BURPS1710b_1545 ABC transporter, periplasmic substrate-binding protein.
       0.509
Srot_1191
KEGG: kra:Krad_3638 hypothetical protein.
       0.509
Srot_1182
KEGG: rop:ROP_40170 hypothetical protein.
       0.411
Srot_1183
KEGG: hypothetical protein.
       0.411
Srot_1184
KEGG: hypothetical protein.
       0.411
Srot_1185
KEGG: sgl:SG1176 hypothetical protein.
       0.411
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.