Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2011KEGG: mab:MAB_4526 hypothetical protein. (134 aa)    
Predicted Functional Partners:
Srot_1706
KEGG: msm:MSMEG_3016 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein.
      
 0.618
Srot_2012
Hypothetical protein; KEGG: rde:RD1_4147 N-acetyl-anhydromuramyl-L- alanine amidase, putative.
       0.557
Srot_1058
PFAM: Cytochrome b/b6 domain; KEGG: mab:MAB_1966c ubiquinol-cytochrome c reductase cytochrome b subunit.
  
     0.469
Srot_2074
PFAM: cytochrome oxidase assembly; KEGG: nfa:nfa35670 putative cytochrome oxidase assembly protein.
  
     0.400
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.