STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2069PFAM: Protein of unknown function DUF2596; KEGG: nfa:nfa51910 hypothetical protein. (168 aa)    
Predicted Functional Partners:
mshA
UDP-N-acetylglucosamine; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
     0.930
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
      0.774
Srot_2068
PFAM: Protein of unknown function DUF2236; KEGG: mab:MAB_1230c hypothetical protein.
       0.773
Srot_1123
KEGG: mva:Mvan_5424 hypothetical protein.
  
     0.770
Srot_1067
PFAM: cyclase/dehydrase; KEGG: mab:MAB_1981 hypothetical protein.
  
     0.762
Srot_2071
PFAM: ROK family protein; KEGG: rha:RHA1_ro02081 ROK family transcriptional regulator.
       0.751
Srot_1108
PFAM: Anion-transporting ATPase; KEGG: mgi:Mflv_1368 anion-transporting ATPase.
  
     0.747
Srot_0195
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mav:MAV_4914 putative acyl-CoA dehydrogenase.
  
     0.735
Srot_0196
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: msm:MSMEG_0406 acyl-CoA-dehydrogenase.
  
     0.735
Srot_1107
PFAM: Anion-transporting ATPase; KEGG: rha:RHA1_ro04317 arsenate (2+)-transporting ATPase.
  
     0.714
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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