STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2137Adenosinetriphosphatase; PFAM: AAA ATPase central domain protein; KEGG: nfa:nfa52890 putative AAA ATPase; SMART: AAA ATPase; Belongs to the AAA ATPase family. (741 aa)    
Predicted Functional Partners:
Srot_1201
KEGG: tfu:Tfu_1830 hypothetical protein.
  
 0.719
Srot_2429
KEGG: mab:MAB_2261c ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.715
Srot_2633
KEGG: mab:MAB_1065 ABC transporter ATP-binding protein; PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase.
  
  
 0.680
Srot_2136
PFAM: X-Pro dipeptidyl-peptidase domain protein; peptidase S15; KEGG: rha:RHA1_ro02596 ABC transporter ATP-binding protein.
       0.661
Srot_0002
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.658
Srot_2430
KEGG: mab:MAB_2262c ABC transporter ATP-binding protein; PFAM: ABC transporter related; FAD-binding 9 siderophore-interacting domain protein; Siderophore- interacting protein; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
 0.655
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
  0.642
Srot_0631
KEGG: rop:ROP_63790 hypothetical protein.
  
     0.630
Srot_0991
KEGG: mgi:Mflv_4218 hypothetical protein.
  
     0.610
Srot_1200
PFAM: ATP-binding region ATPase domain protein; KEGG: tfu:Tfu_1831 HSP90 family protein.
   
 0.605
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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