STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2393KEGG: bpl:BURPS1106A_1662 major facilitator superfamily permease. (106 aa)    
Predicted Functional Partners:
Srot_2391
KEGG: mgi:Mflv_4293 hypothetical protein.
       0.705
Srot_2392
PFAM: protein of unknown function DUF1023; KEGG: sen:SACE_1344 PE-PGRS family protein.
       0.705
Srot_2394
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.675
Srot_2395
KEGG: mkm:Mkms_0085 hypothetical protein.
       0.675
Srot_2396
KEGG: nfa:nfa48400 hypothetical protein.
       0.674
Srot_2397
KEGG: btk:BT9727_0992 hypothetical protein.
       0.674
Srot_2398
KEGG: rrs:RoseRS_0128 peptidase C14, caspase catalytic subunit P20.
       0.552
Srot_2399
KEGG: putative actin binding protein.
       0.411
Srot_2400
Hypothetical protein; KEGG: mno:Mnod_7463 copper-translocating P-type ATPase.
       0.411
Srot_2401
Hypothetical protein; KEGG: bln:Blon_1259 allergen V5/TPX-1 family protein.
       0.411
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.