Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Srot_2449 | Srot_2450 | KEGG: hypothetical protein. | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | 0.592 |
Srot_2449 | Srot_2451 | KEGG: hypothetical protein. | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | 0.439 |
Srot_2449 | Srot_2452 | KEGG: hypothetical protein. | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | 0.439 |
Srot_2449 | Srot_2453 | KEGG: hypothetical protein. | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | 0.439 |
Srot_2450 | Srot_2449 | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | KEGG: hypothetical protein. | 0.592 |
Srot_2450 | Srot_2451 | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | 0.559 |
Srot_2450 | Srot_2452 | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | 0.559 |
Srot_2450 | Srot_2453 | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | 0.559 |
Srot_2451 | Srot_2449 | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | KEGG: hypothetical protein. | 0.439 |
Srot_2451 | Srot_2450 | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | 0.559 |
Srot_2451 | Srot_2452 | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | 0.789 |
Srot_2451 | Srot_2453 | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | 0.806 |
Srot_2452 | Srot_2449 | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | KEGG: hypothetical protein. | 0.439 |
Srot_2452 | Srot_2450 | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | 0.559 |
Srot_2452 | Srot_2451 | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | 0.789 |
Srot_2452 | Srot_2453 | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | 0.773 |
Srot_2453 | Srot_2449 | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | KEGG: hypothetical protein. | 0.439 |
Srot_2453 | Srot_2450 | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | PFAM: fatty acid hydroxylase; KEGG: amc:MADE_02945 sterol desaturase-related protein. | 0.559 |
Srot_2453 | Srot_2451 | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | PFAM: protein of unknown function DUF453; KEGG: pna:Pnap_3805 hypothetical protein. | 0.806 |
Srot_2453 | Srot_2452 | PFAM: amidohydrolase 2; KEGG: nfa:nfa53630 hypothetical protein. | KEGG: cdi:DIP0128 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase. | 0.773 |