STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2495PFAM: protein of unknown function DUF909; KEGG: mjl:Mjls_0060 10 kDa culture filtrate antigen LHP (CFP10); Belongs to the WXG100 family. (99 aa)    
Predicted Functional Partners:
Srot_2494
PFAM: protein of unknown function DUF909; KEGG: cgt:cgR_0698 hypothetical protein; Belongs to the WXG100 family.
  
 
 0.999
Srot_0746
PFAM: protein of unknown function DUF909; KEGG: msm:MSMEG_0621 low molecular weight protein antigen 7; Belongs to the WXG100 family.
   
  
 0.834
Srot_2496
PFAM: PPE protein; KEGG: msm:MSMEG_0064 PPE family protein.
     
 0.787
Srot_0745
KEGG: mva:Mvan_0417 hypothetical protein.
   
 
 0.769
Srot_2492
PFAM: cell divisionFtsK/SpoIIIE; KEGG: nfa:nfa8290 putative FtsK/SpoIIIE family protein.
   
 
 0.606
Srot_0924
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: mab:MAB_3074c cell division protein FtsK.
    
 
 0.568
Srot_0309
KEGG: nfa:nfa42700 hypothetical protein; Belongs to the WXG100 family.
  
 
 0.487
Srot_0785
KEGG: nfa:nfa42700 hypothetical protein; Belongs to the WXG100 family.
  
 
 0.487
Srot_1100
KEGG: mav:MAV_4643 hypothetical protein.
  
 
 0.487
Srot_2805
KEGG: nfa:nfa42700 hypothetical protein; Belongs to the WXG100 family.
  
 
 0.487
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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