STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_3052Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: gbr:Gbro_3937 thiosulfate sulfurtransferase; SMART: Rhodanese domain protein. (277 aa)    
Predicted Functional Partners:
Srot_3053
PFAM: protein of unknown function DUF1416; KEGG: mmi:MMAR_4869 sulphur metabolism protein, SseC2.
  
 0.935
Srot_2009
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; flavodoxin/nitric oxide synthase; FAD- binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mva:Mvan_3491 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.926
Srot_2032
PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: msm:MSMEG_2394 cystathionine gamma-lyase.
 
 
 0.918
Srot_1571
KEGG: rer:RER_23770 cysteine desulfurase; PFAM: aminotransferase class V.
   
 0.916
Srot_2680
PFAM: flavodoxin/nitric oxide synthase; FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mab:MAB_2485c sulfite reductase.
    
 0.913
Srot_1378
KEGG: rer:RER_37460 sulfite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
   
 0.911
Srot_0520
Rhodanese domain protein; KEGG: rer:RER_21240 thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
  
 
0.907
cysH
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.907
Srot_1720
PFAM: DoxX family protein; KEGG: gfo:GFO_3158 membrane protein.
   
 
  0.901
Srot_1508
Alkanesulfonate monooxygenase; KEGG: mmi:MMAR_4200 F420-dependent glucose-6- phosphate dehydrogenase Fgd2.
     
  0.900
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.