Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE82743.1 | SDE82762.1 | SAMN05216381_0002 | SAMN05216381_0003 | Paraquat-inducible protein A. | Paraquat-inducible protein A. | 0.773 |
SDE82743.1 | SDE82787.1 | SAMN05216381_0002 | SAMN05216381_0004 | Paraquat-inducible protein A. | Paraquat-inducible protein B. | 0.810 |
SDE82743.1 | lipB | SAMN05216381_0002 | SAMN05216381_1427 | Paraquat-inducible protein A. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.539 |
SDE82762.1 | SDE82743.1 | SAMN05216381_0003 | SAMN05216381_0002 | Paraquat-inducible protein A. | Paraquat-inducible protein A. | 0.773 |
SDE82762.1 | SDE82787.1 | SAMN05216381_0003 | SAMN05216381_0004 | Paraquat-inducible protein A. | Paraquat-inducible protein B. | 0.961 |
SDE82762.1 | SDF89955.1 | SAMN05216381_0003 | SAMN05216381_2682 | Paraquat-inducible protein A. | Hypothetical protein. | 0.566 |
SDE82762.1 | lipB | SAMN05216381_0003 | SAMN05216381_1427 | Paraquat-inducible protein A. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.650 |
SDE82787.1 | SDE82743.1 | SAMN05216381_0004 | SAMN05216381_0002 | Paraquat-inducible protein B. | Paraquat-inducible protein A. | 0.810 |
SDE82787.1 | SDE82762.1 | SAMN05216381_0004 | SAMN05216381_0003 | Paraquat-inducible protein B. | Paraquat-inducible protein A. | 0.961 |
SDE82787.1 | SDF89955.1 | SAMN05216381_0004 | SAMN05216381_2682 | Paraquat-inducible protein B. | Hypothetical protein. | 0.565 |
SDF89955.1 | SDE82762.1 | SAMN05216381_2682 | SAMN05216381_0003 | Hypothetical protein. | Paraquat-inducible protein A. | 0.566 |
SDF89955.1 | SDE82787.1 | SAMN05216381_2682 | SAMN05216381_0004 | Hypothetical protein. | Paraquat-inducible protein B. | 0.565 |
lipB | SDE82743.1 | SAMN05216381_1427 | SAMN05216381_0002 | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Paraquat-inducible protein A. | 0.539 |
lipB | SDE82762.1 | SAMN05216381_1427 | SAMN05216381_0003 | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | Paraquat-inducible protein A. | 0.650 |