Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDE94631.1 | SDE94657.1 | SAMN05216381_0456 | SAMN05216381_0457 | Miniconductance mechanosensitive channel. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.493 |
SDE94631.1 | SDE94686.1 | SAMN05216381_0456 | SAMN05216381_0458 | Miniconductance mechanosensitive channel. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.474 |
SDE94631.1 | gcvP | SAMN05216381_0456 | SAMN05216381_0150 | Miniconductance mechanosensitive channel. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.539 |
SDE94631.1 | leuA | SAMN05216381_0456 | SAMN05216381_0455 | Miniconductance mechanosensitive channel. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.471 |
SDE94657.1 | SDE94631.1 | SAMN05216381_0457 | SAMN05216381_0456 | Glutathione S-transferase; Belongs to the GST superfamily. | Miniconductance mechanosensitive channel. | 0.493 |
SDE94657.1 | SDE94686.1 | SAMN05216381_0457 | SAMN05216381_0458 | Glutathione S-transferase; Belongs to the GST superfamily. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.549 |
SDE94686.1 | SDE94631.1 | SAMN05216381_0458 | SAMN05216381_0456 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Miniconductance mechanosensitive channel. | 0.474 |
SDE94686.1 | SDE94657.1 | SAMN05216381_0458 | SAMN05216381_0457 | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.549 |
gcvP | SDE94631.1 | SAMN05216381_0150 | SAMN05216381_0456 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Miniconductance mechanosensitive channel. | 0.539 |
gcvP | leuA | SAMN05216381_0150 | SAMN05216381_0455 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.418 |
leuA | SDE94631.1 | SAMN05216381_0455 | SAMN05216381_0456 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | Miniconductance mechanosensitive channel. | 0.471 |
leuA | gcvP | SAMN05216381_0455 | SAMN05216381_0150 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.418 |