Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF25753.1 | SDF75329.1 | SAMN05216381_1170 | SAMN05216381_2355 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Site-specific recombinase XerD. | 0.774 |
SDF25753.1 | aroA | SAMN05216381_1170 | SAMN05216381_2789 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.401 |
SDF25753.1 | fadB | SAMN05216381_1170 | SAMN05216381_2090 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.881 |
SDF75200.1 | SDF75231.1 | SAMN05216381_2351 | SAMN05216381_2352 | Hypothetical protein. | Protein of unknown function. | 0.951 |
SDF75200.1 | SDF75265.1 | SAMN05216381_2351 | SAMN05216381_2353 | Hypothetical protein. | Zona occludens toxin. | 0.940 |
SDF75200.1 | SDF75301.1 | SAMN05216381_2351 | SAMN05216381_2354 | Hypothetical protein. | Hypothetical protein. | 0.766 |
SDF75200.1 | SDF75329.1 | SAMN05216381_2351 | SAMN05216381_2355 | Hypothetical protein. | Site-specific recombinase XerD. | 0.772 |
SDF75231.1 | SDF75200.1 | SAMN05216381_2352 | SAMN05216381_2351 | Protein of unknown function. | Hypothetical protein. | 0.951 |
SDF75231.1 | SDF75265.1 | SAMN05216381_2352 | SAMN05216381_2353 | Protein of unknown function. | Zona occludens toxin. | 0.931 |
SDF75231.1 | SDF75301.1 | SAMN05216381_2352 | SAMN05216381_2354 | Protein of unknown function. | Hypothetical protein. | 0.676 |
SDF75231.1 | SDF75329.1 | SAMN05216381_2352 | SAMN05216381_2355 | Protein of unknown function. | Site-specific recombinase XerD. | 0.715 |
SDF75265.1 | SDF75200.1 | SAMN05216381_2353 | SAMN05216381_2351 | Zona occludens toxin. | Hypothetical protein. | 0.940 |
SDF75265.1 | SDF75231.1 | SAMN05216381_2353 | SAMN05216381_2352 | Zona occludens toxin. | Protein of unknown function. | 0.931 |
SDF75265.1 | SDF75301.1 | SAMN05216381_2353 | SAMN05216381_2354 | Zona occludens toxin. | Hypothetical protein. | 0.791 |
SDF75265.1 | SDF75329.1 | SAMN05216381_2353 | SAMN05216381_2355 | Zona occludens toxin. | Site-specific recombinase XerD. | 0.693 |
SDF75301.1 | SDF75200.1 | SAMN05216381_2354 | SAMN05216381_2351 | Hypothetical protein. | Hypothetical protein. | 0.766 |
SDF75301.1 | SDF75231.1 | SAMN05216381_2354 | SAMN05216381_2352 | Hypothetical protein. | Protein of unknown function. | 0.676 |
SDF75301.1 | SDF75265.1 | SAMN05216381_2354 | SAMN05216381_2353 | Hypothetical protein. | Zona occludens toxin. | 0.791 |
SDF75301.1 | SDF75329.1 | SAMN05216381_2354 | SAMN05216381_2355 | Hypothetical protein. | Site-specific recombinase XerD. | 0.837 |
SDF75329.1 | SDF25753.1 | SAMN05216381_2355 | SAMN05216381_1170 | Site-specific recombinase XerD. | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.774 |
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