STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG26771.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family. (239 aa)    
Predicted Functional Partners:
SDG26824.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
SDG26854.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.974
SDG26882.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.971
SDG26800.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
0.970
SDF75927.1
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.929
SDF92323.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.915
SDF75961.1
L-leucine ABC transporter ATP-binding protein.
 
0.893
SDF75896.1
L-leucine ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.866
SDF92348.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.865
SDG26740.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
    
  0.840
Your Current Organism:
Pseudomonas seleniipraecipitans
NCBI taxonomy Id: 640205
Other names: LMG 25475, LMG:25475, NRRL B-51283, P. seleniipraecipitans, Pseudomonas seleniipraecipitans corrig. Hunter and Manter 2011, Pseudomonas seleniipraecipitatus, Pseudomonas sp. CA5, strain CA5
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