STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG29589.1DNA-methyltransferase (dcm); Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (849 aa)    
Predicted Functional Partners:
SDG29564.1
T/G mismatch-specific endonuclease.
 
   
 0.845
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.690
SDF56447.1
Adenosylhomocysteinase.
     
 0.632
SDG29969.1
Inner membrane protein.
   
    0.539
SDF89016.1
Glycosyltransferase, GT2 family.
  
 
 0.491
tpm
Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.
  
  
  0.443
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
    
  0.441
SDE93375.1
NUDIX domain-containing protein.
  
  
  0.440
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
   
 
 0.440
SDG18758.1
Molybdate transport system regulatory protein.
    
  0.437
Your Current Organism:
Pseudomonas seleniipraecipitans
NCBI taxonomy Id: 640205
Other names: LMG 25475, LMG:25475, NRRL B-51283, P. seleniipraecipitans, Pseudomonas seleniipraecipitans corrig. Hunter and Manter 2011, Pseudomonas seleniipraecipitatus, Pseudomonas sp. CA5, strain CA5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.