STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG36496.1Cyanate permease. (380 aa)    
Predicted Functional Partners:
SDE86731.1
Hypothetical protein; Belongs to the UPF0246 family.
  
    0.726
SDF20151.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.547
SDG36469.1
Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.537
SDG36440.1
Hypothetical protein.
 
   
 0.500
SDE97697.1
MFS transporter, FSR family, fosmidomycin resistance protein.
 
  
  0.494
SDF71726.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.467
SDF72020.1
Flagella synthesis protein FlgN.
  
     0.460
SDF87898.1
Uncharacterized conserved protein YdgA, DUF945 family.
  
     0.422
Your Current Organism:
Pseudomonas seleniipraecipitans
NCBI taxonomy Id: 640205
Other names: LMG 25475, LMG:25475, NRRL B-51283, P. seleniipraecipitans, Pseudomonas seleniipraecipitans corrig. Hunter and Manter 2011, Pseudomonas seleniipraecipitatus, Pseudomonas sp. CA5, strain CA5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.