STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG14683.1PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_0807 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (417 aa)    
Predicted Functional Partners:
ADG14682.1
PFAM: pyruvate carboxyltransferase; KEGG: bpy:Bphyt_0806 pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
  0.845
ADG14684.1
PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0808 major facilitator superfamily MFS_1.
       0.588
ADG14681.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_0805 transcriptional regulator, LysR family.
       0.412
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.