STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG16247.1KEGG: bpy:Bphyt_2958 conserved hypothetical signal peptide protein. (225 aa)    
Predicted Functional Partners:
ADG16248.1
KEGG: bpy:Bphyt_2959 hypothetical protein.
 
     0.934
ADG16249.1
PFAM: peptidase C39 bacteriocin processing; KEGG: bxe:Bxe_A1024 putative peptidase.
 
     0.885
ADG16251.1
KEGG: bpy:Bphyt_2962 hypothetical protein.
 
     0.861
ADG16246.1
KEGG: bpy:Bphyt_2957 hypothetical protein.
       0.797
ADG20129.1
KEGG: bxe:Bxe_C1368 hypothetical protein.
  
     0.721
ADG18847.1
KEGG: bxe:Bxe_C1276 outer membrane autotransporter barrel protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin.
  
     0.696
ADG17629.1
KEGG: bpy:Bphyt_4755 hypothetical protein.
  
     0.691
ADG17400.1
KEGG: bpy:Bphyt_6042 transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR.
  
     0.622
ADG17519.1
KEGG: bpy:Bphyt_5924 hypothetical protein.
  
     0.585
ADG20512.1
KEGG: bpy:Bphyt_6751 chromosome segregation ATPase-like protein.
  
     0.585
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.