STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG17254.1TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: bxe:Bxe_B2451 CbbX-like protein, putative AAA ATPase; SMART: AAA ATPase. (331 aa)    
Predicted Functional Partners:
ADG16280.1
KEGG: bxe:Bxe_A0992 putative histone deacetylase-family protein; PFAM: histone deacetylase superfamily.
   
 0.942
ADG17253.1
KEGG: bxe:Bxe_B2452 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: ribulose bisphosphate carboxylase small chain.
 
  
 0.942
ADG14116.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.917
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
  
 0.898
ADG16882.1
KEGG: bpy:Bphyt_3576 ABC transporter domain protein; PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase.
     
 0.864
ADG17256.1
Phosphoribulokinase; KEGG: bxe:Bxe_B2449 phosphoribulokinase; PFAM: phosphoribulokinase/uridine kinase.
 
    0.854
ADG15561.1
KEGG: bxe:Bxe_A2262 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit.
   
 0.849
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.838
htpG
Heat shock protein Hsp90-like protein; Molecular chaperone. Has ATPase activity.
   
 0.805
fbp-2
PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: bxe:Bxe_B2450 fructose-1,6-bisphosphatase.
 
 
 0.800
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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