STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG17320.1KEGG: bam:Bamb_3864 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3. (317 aa)    
Predicted Functional Partners:
ADG17319.1
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: ABC transporter related; binding-protein-dependent transport systems inner membrane component; KEGG: bpl:BURPS1106A_A2265 ABC-type polar amino acid transport system, ATPase component; SMART: AAA ATPase.
 
 
 0.945
ADG17315.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bcj:BCAM1559 putative acetyltransferase.
 
  
 0.823
ADG17318.1
KEGG: bpl:BURPS1106A_A2267 flavin-dependent oxidoreductase.
 
    0.801
ADG17317.1
KEGG: bpm:BURPS1710b_A0739 luciferase-like monooxygenase superfamily protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup.
 
    0.642
ADG17316.1
Extracellular solute-binding protein family 3; KEGG: bpd:BURPS668_A2408 cystine-binding periplasmic protein FliY; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
 
    
0.481
ADG17321.1
KEGG: bxe:Bxe_C0153 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA.
       0.473
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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