STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG17898.1PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_5278 major facilitator superfamily MFS_1. (447 aa)    
Predicted Functional Partners:
ADG18672.1
PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4118 porin gram-negative type.
  
     0.706
ADG20129.1
KEGG: bxe:Bxe_C1368 hypothetical protein.
  
     0.648
ADG17400.1
KEGG: bpy:Bphyt_6042 transcriptional regulator, LuxR family; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR.
  
     0.647
ADG19354.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bcm:Bcenmc03_1720 TonB-dependent receptor.
  
     0.642
ADG18857.1
KEGG: bam:Bamb_1277 hypothetical protein.
  
   
 0.614
ADG15690.1
PFAM: Fertility inhibition FinO-like; KEGG: bpy:Bphyt_2177 ProQ activator of osmoprotectant transporter ProP.
  
     0.608
ADG17431.1
PFAM: LmbE family protein; KEGG: bpy:Bphyt_5995 LmbE family protein.
 
     0.594
ADG15765.1
KEGG: bpy:Bphyt_2284 hypothetical protein.
  
     0.577
ADG18905.1
KEGG: bph:Bphy_5727 hypothetical protein.
  
   
 0.569
ADG17629.1
KEGG: bpy:Bphyt_4755 hypothetical protein.
  
     0.567
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.