STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG18878.1PFAM: Methyltransferase type 11; KEGG: bpy:Bphyt_4338 O-methyltransferase family 3. (238 aa)    
Predicted Functional Partners:
ADG18879.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bpy:Bphyt_4337 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
     0.759
ADG18880.1
KEGG: bpy:Bphyt_4336 hypothetical protein.
       0.714
ADG18881.1
RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: bxe:Bxe_A1388 sigma-24 (FecI); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; Belongs to the sigma-70 factor family. ECF subfamily.
       0.703
ADG18882.1
Extracellular solute-binding protein family 3; KEGG: bxe:Bxe_C0819 polar amino acid ABC transporter periplasmic ligand-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3.
       0.480
ADG16703.1
Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
   
    0.426
ADG14565.1
PFAM: putative RNA methylase; THUMP domain protein; KEGG: bxe:Bxe_A4003 hypothetical protein; Belongs to the methyltransferase superfamily.
  
  
 0.409
ADG17427.1
TIGRFAM: phosphoenolpyruvate phosphomutase; KEGG: bxe:Bxe_B2235 2,3-dimethylmalate lyase.
     
 0.407
ADG16367.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
 
   
 0.401
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.