STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG20407.1KEGG: bbr:BB3484 hypothetical protein. (89 aa)    
Predicted Functional Partners:
ADG20408.1
KEGG: bpt:Bpet0998 hypothetical protein.
   
   0.848
ADG20405.1
Carbohydrate-binding family V/XII; KEGG: bgl:bglu_1g21280 tail fiber protein; PFAM: Carbohydrate-binding family V/XII; SMART: Carbohydrate-binding family V/XII.
   
   0.842
ADG20409.1
KEGG: swi:Swit_4467 hypothetical protein.
       0.773
ADG20404.1
KEGG: xfa:XF1705 hypothetical protein.
   
   0.741
ADG20406.1
KEGG: cjd:JJD26997_1146 hypothetical protein.
       0.634
ADG20403.1
KEGG: xft:PD0959 hypothetical protein.
       0.613
ADG20410.1
PFAM: Peptidase M15A; KEGG: bte:BTH_II1066 hypothetical protein.
       0.548
ADG14394.1
KEGG: bpy:Bphyt_0563 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region; Belongs to the PEP-utilizing enzyme family.
  
  
 0.544
ADG19440.1
KEGG: cvi:CV_0980 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region.
  
  
 0.544
ADG20411.1
PFAM: holin family 2; KEGG: eca:ECA2617 phage lysis protein Y, holin.
       0.534
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.