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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureFUrease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (226 aa)    
Predicted Functional Partners:
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.999
ureE
UreE urease accessory domain-containing protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
  
 0.998
ureC
TIGRFAM: urease, alpha subunit; KEGG: bpy:Bphyt_0928 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain-containing protein.
 
 
 0.997
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.991
ureA
TIGRFAM: urease, gamma subunit; KEGG: bmj:BMULJ_00748 urease subunit gamma; PFAM: Urease gamma subunit region; Belongs to the urease gamma subunit family.
 
 
 0.989
ureB
TIGRFAM: urease, beta subunit; KEGG: bpy:Bphyt_0929 urease, beta subunit; PFAM: Urease beta subunit; Belongs to the urease beta subunit family.
 
 
 0.982
ADN56799.1
Urea ABC transporter, ATP-binding protein UrtD; KEGG: bxe:Bxe_A3686 branched chain amino acid ABC transporter ATPase; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related.
 
   
 0.716
ADN61615.1
PFAM: Urea transporter; KEGG: bpy:Bphyt_4874 UreA transporter.
 
  
 0.671
ADN56802.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: UreA ABC transporter, UreA binding protein.
 
   
 0.657
ADN56800.1
Urea ABC transporter, permease protein UrtC; KEGG: bxe:Bxe_A3685 branched chain amino acid ABC transporter inner membrane protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.633
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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