node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADN56999.1 | ADN57286.1 | BC1003_1019 | BC1003_1310 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | 0.808 |
ADN56999.1 | ADN59087.1 | BC1003_1019 | BC1003_3140 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | PFAM: Stringent starvation protein B; KEGG: bxe:Bxe_A0418 ClpXP protease specificity-enhancing factor. | 0.658 |
ADN56999.1 | bamE | BC1003_1019 | BC1003_2965 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | SmpA/OmlA domain-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.637 |
ADN56999.1 | cca | BC1003_1019 | BC1003_3298 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.439 |
ADN56999.1 | ftsB | BC1003_1019 | BC1003_1186 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.484 |
ADN56999.1 | rpmF | BC1003_1019 | BC1003_2522 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | KEGG: bpy:Bphyt_2914 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.459 |
ADN57285.1 | ADN57286.1 | BC1003_1309 | BC1003_1310 | PFAM: cyclase/dehydrase; KEGG: bpy:Bphyt_2434 cyclase/dehydrase. | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | 0.929 |
ADN57285.1 | smpB | BC1003_1309 | BC1003_1308 | PFAM: cyclase/dehydrase; KEGG: bpy:Bphyt_2434 cyclase/dehydrase. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.627 |
ADN57286.1 | ADN56999.1 | BC1003_1310 | BC1003_1019 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.808 |
ADN57286.1 | ADN57285.1 | BC1003_1310 | BC1003_1309 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | PFAM: cyclase/dehydrase; KEGG: bpy:Bphyt_2434 cyclase/dehydrase. | 0.929 |
ADN57286.1 | ADN58655.1 | BC1003_1310 | BC1003_2702 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | PFAM: protein of unknown function YGGT; KEGG: bxe:Bxe_A0880 hypothetical protein. | 0.510 |
ADN57286.1 | ADN59087.1 | BC1003_1310 | BC1003_3140 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | PFAM: Stringent starvation protein B; KEGG: bxe:Bxe_A0418 ClpXP protease specificity-enhancing factor. | 0.593 |
ADN57286.1 | bamE | BC1003_1310 | BC1003_2965 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | SmpA/OmlA domain-containing protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.529 |
ADN57286.1 | cca | BC1003_1310 | BC1003_3298 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.653 |
ADN57286.1 | dapE | BC1003_1310 | BC1003_1275 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.553 |
ADN57286.1 | ftsB | BC1003_1310 | BC1003_1186 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.510 |
ADN57286.1 | rpmF | BC1003_1310 | BC1003_2522 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | KEGG: bpy:Bphyt_2914 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.532 |
ADN57286.1 | smpB | BC1003_1310 | BC1003_1308 | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.616 |
ADN58655.1 | ADN57286.1 | BC1003_2702 | BC1003_1310 | PFAM: protein of unknown function YGGT; KEGG: bxe:Bxe_A0880 hypothetical protein. | PFAM: protein of unknown function UPF0125; KEGG: protein of unknown function UPF0125; Belongs to the UPF0125 (RnfH) family. | 0.510 |
ADN58655.1 | ftsB | BC1003_2702 | BC1003_1186 | PFAM: protein of unknown function YGGT; KEGG: bxe:Bxe_A0880 hypothetical protein. | Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.446 |