Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADN57159.1 | ADN57479.1 | BC1003_1181 | BC1003_1508 | KEGG: bpy:Bphyt_2564 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein. | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | 0.416 |
ADN57159.1 | ADN58623.1 | BC1003_1181 | BC1003_2670 | KEGG: bpy:Bphyt_2564 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein. | SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bxe:Bxe_A0914 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein. | 0.509 |
ADN57479.1 | ADN57159.1 | BC1003_1508 | BC1003_1181 | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | KEGG: bpy:Bphyt_2564 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein. | 0.416 |
ADN57479.1 | ADN57480.1 | BC1003_1508 | BC1003_1509 | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | KEGG: bpy:Bphyt_1795 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc. | 0.555 |
ADN57479.1 | ADN58623.1 | BC1003_1508 | BC1003_2670 | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bxe:Bxe_A0914 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein. | 0.491 |
ADN57479.1 | ADN59281.1 | BC1003_1508 | BC1003_3335 | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.402 |
ADN57480.1 | ADN57479.1 | BC1003_1509 | BC1003_1508 | KEGG: bpy:Bphyt_1795 PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc. | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | 0.555 |
ADN58623.1 | ADN57159.1 | BC1003_2670 | BC1003_1181 | SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bxe:Bxe_A0914 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein. | KEGG: bpy:Bphyt_2564 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein. | 0.509 |
ADN58623.1 | ADN57479.1 | BC1003_2670 | BC1003_1508 | SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bxe:Bxe_A0914 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein. | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | 0.491 |
ADN59281.1 | ADN57479.1 | BC1003_3335 | BC1003_1508 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | PFAM: NLP/P60 protein; KEGG: bpy:Bphyt_1794 NLP/P60 protein. | 0.402 |