STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN57503.1KEGG: bpy:Bphyt_1818 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE. (459 aa)    
Predicted Functional Partners:
ADN57504.1
KEGG: bpy:Bphyt_1819 putative inner membrane protein.
 
    0.858
ADN58919.1
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bpy:Bphyt_3390 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.614
ADN58553.1
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.578
ADN57564.1
PFAM: Squalene/phytoene synthase; KEGG: bxe:Bxe_A2303 putative phytoene synthase.
   
 
 0.536
ADN60457.1
TIGRFAM: squalene synthase HpnD; KEGG: bpy:Bphyt_7027 squalene synthase HpnD; PFAM: Squalene/phytoene synthase.
   
 
 0.536
ADN60843.1
PFAM: Squalene/phytoene synthase; KEGG: bpy:Bphyt_4026 squalene/phytoene synthase.
   
 
 0.536
rpmE2
KEGG: bpy:Bphyt_1820 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31.
       0.461
ADN56332.1
PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: bpy:Bphyt_0602 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.450
ADN61865.1
Amino acid adenylation domain protein; KEGG: bcj:BCAM0195 putative non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Male sterility domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.438
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.