STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN57944.1KEGG: bpy:Bphyt_1648 putative membrane protein, glycine-rich. (506 aa)    
Predicted Functional Partners:
ADN57946.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: bxe:Bxe_A2806 putative hemolysin activation/secretion signal peptide protein, FhaC/HxuB.
 
 
 0.863
ADN56223.1
KEGG: bpy:Bphyt_0480 hypothetical protein.
 
 
 0.773
ADN61471.1
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B1041 OmpC family outer membrane porin.
  
    0.767
ADN57942.1
PFAM: peptidase A24A prepilin type IV; KEGG: bpy:Bphyt_1650 peptidase A24A prepilin type IV.
  
     0.759
ADN56260.1
KEGG: bxe:Bxe_A4193 hypothetical protein.
  
     0.752
ADN58119.1
KEGG: bxe:Bxe_A2929 putative lipoprotein.
  
     0.752
ADN56238.1
PFAM: VanZ family protein; KEGG: bxe:Bxe_A4221 hypothetical protein.
  
     0.744
ADN59225.1
PFAM: OmpW family protein; KEGG: bpy:Bphyt_3683 OmpW family protein.
  
     0.720
ADN56183.1
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_A4279 OmpC family outer membrane porin.
  
    0.708
ADN57934.1
KEGG: bpy:Bphyt_1658 tetratricopeptide TPR_2 repeat protein.
  
   
 0.708
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.