STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN57966.1PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_1627 aspartate aminotransferase. (412 aa)    
Predicted Functional Partners:
ADN59137.1
KEGG: bxe:Bxe_A0365 glutamate synthase (NADH) large subunit; PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.547
ADN61865.1
Amino acid adenylation domain protein; KEGG: bcj:BCAM0195 putative non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Male sterility domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.487
ADN58558.1
KEGG: bpy:Bphyt_3006 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein.
 
  
 0.447
ADN58926.1
PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: bpy:Bphyt_3399 malic enzyme.
  
 
 0.438
ADN59218.1
PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: bpy:Bphyt_3674 malic enzyme; Belongs to the malic enzymes family.
  
 
 0.438
ADN58723.1
PFAM: Citrate synthase; regulatory protein MerR; KEGG: bpy:Bphyt_3184 citrate synthase.
 
 
 0.431
ADN57965.1
Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
    0.422
ADN60070.1
KEGG: NAD(P)H dehydrogenase (quinone); PFAM: NAD(P)H dehydrogenase (quinone).
   
    0.414
ADN56469.1
KEGG: bpy:Bphyt_0739 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV.
  
 
 0.410
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.400
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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