Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADN57966.1PFAM: aminotransferase class I and II; KEGG: bpy:Bphyt_1627 aspartate aminotransferase. (412 aa)    
Predicted Functional Partners:
ADN59137.1
KEGG: bxe:Bxe_A0365 glutamate synthase (NADH) large subunit; PFAM: glutamine amidotransferase class-II; glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein.
     
 0.549
ADN61865.1
Amino acid adenylation domain protein; KEGG: bcj:BCAM0195 putative non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; thioester reductase domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Male sterility domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.455
ADN57965.1
Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
  
    0.429
ADN60102.1
TIGRFAM: tartrate dehydrogenase; KEGG: bxe:Bxe_C1229 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase.
 
 
 0.412
ADN58558.1
KEGG: bpy:Bphyt_3006 chorismate mutase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein.
 
  
 0.411
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
 
   0.400
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
Server load: low (14%) [HD]