Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADN57968.1KEGG: bpy:Bphyt_1625 putative transposase A protein. (133 aa)    
Predicted Functional Partners:
ADN58827.1
PFAM: O-antigen polymerase; KEGG: bxe:Bxe_A0678 hypothetical protein.
  
     0.747
ADN58822.1
KEGG: bxe:Bxe_A0683 hypothetical protein.
  
     0.736
ADN57859.1
KEGG: bpy:Bphyt_2299 tetratricopeptide TPR_2 repeat protein.
  
     0.735
ADN57434.1
KEGG: bpy:Bphyt_1743 putative transmembrane protein.
  
     0.724
ADN61612.1
PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_4871 porin gram-negative type.
  
     0.717
ADN59399.1
PFAM: ATP synthase I chain; KEGG: bxe:Bxe_A0033 putative ATP synthase protein I.
  
     0.706
ADN58146.1
PFAM: PRC-barrel domain protein; KEGG: bxe:Bxe_A2952 hypothetical protein.
  
     0.681
ADN59425.1
Regulatory protein MarR; KEGG: bpy:Bphyt_3929 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
     0.675
ADN57456.1
KEGG: bpy:Bphyt_1770 putative transmembrane protein.
  
     0.666
ADN58626.1
PFAM: porin Gram-negative type; KEGG: bpy:Bphyt_3080 porin gram-negative type.
  
     0.663
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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