STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN57975.1KEGG: bxe:Bxe_A2834 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein. (438 aa)    
Predicted Functional Partners:
ADN60646.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: diguanylate cyclase; SMART: GGDEF domain containing protein.
 
  
 0.855
ADN60092.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bpy:Bphyt_5950 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein.
 
  
 0.821
ADN60458.1
Diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bxe:Bxe_B0009 diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein.
  
 0.820
ADN58095.1
TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: bxe:Bxe_B0294 diguanylate cyclase; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein.
  
 0.815
ADN59664.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpy:Bphyt_5319 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
  
 0.811
ADN60217.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_B2239 diguanylate cyclase; SMART: GGDEF domain containing protein.
  
 0.811
ADN60870.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bvi:Bcep1808_6345 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
  
 0.806
ADN61406.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpy:Bphyt_5670 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
  
 0.802
ADN61528.1
Diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bph:Bphy_6413 diguanylate cyclase with PAS/PAC sensor; SMART: GGDEF domain containing protein; PAS domain containing protein.
 
  
 0.801
ADN56926.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bxe:Bxe_A3384 diguanylate cyclase; SMART: GGDEF domain containing protein.
 
  
 0.798
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.