STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN59155.1KEGG: bxe:Bxe_A0347 cytochrome c biogenesis protein. (732 aa)    
Predicted Functional Partners:
ADN59154.1
KEGG: bxe:Bxe_A0348 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein.
 
  
 0.994
ADN61088.1
PFAM: Redoxin domain protein; cytochrome c biogenesis protein transmembrane region; KEGG: bmj:BMULJ_06142 putative cytochrome c biogenesis protein.
  
  
 0.810
ADN58259.1
KEGG: hypothetical protein.
  
     0.774
ADN56259.1
PFAM: Redoxin domain protein; KEGG: bpy:Bphyt_0521 redoxin domain protein.
 
  
 0.744
ADN56375.1
PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: bpy:Bphyt_0646 FAD linked oxidase domain protein.
  
     0.616
ADN56857.1
PFAM: Protein of unknown function DUF3460; KEGG: bpy:Bphyt_1012 hypothetical protein.
  
     0.610
ADN57282.1
PFAM: protein of unknown function DUF107; KEGG: bxe:Bxe_A1700 hypothetical protein.
  
     0.605
ADN60534.1
KEGG: protein of unknown function DUF339; manually curated; PFAM: protein of unknown function DUF339.
  
     0.579
ADN56837.1
PFAM: protein of unknown function DUF541; KEGG: bxe:Bxe_A3631 hypothetical protein.
  
     0.565
ADN59156.1
PFAM: cytochrome c class I; KEGG: bxe:Bxe_A0346 cytochrome c, class I.
     
 0.560
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.