STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN60096.1Lipoprotein, YaeC family; KEGG: bxe:Bxe_B2191 ABC amino acid transporter, periplasmic ligand binding protein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; Belongs to the nlpA lipoprotein family. (271 aa)    
Predicted Functional Partners:
ADN58539.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2987 binding-protein-dependent transport systems inner membrane component.
 0.990
ADN61201.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_4540 binding-protein-dependent transport systems inner membrane component.
 0.989
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.987
metN-2
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.987
ADN58349.1
TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bpy:Bphyt_2770 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein.
  
    0.424
ADN60906.1
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bph:Bphy_6599 hypothetical protein.
  
    0.424
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
  
 0.403
ADN60097.1
PFAM: porin Gram-negative type; KEGG: bxe:Bxe_B2192 OmpC family outer membrane porin.
     
 0.402
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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