STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN60919.1PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_6449 major facilitator transporter. (404 aa)    
Predicted Functional Partners:
ADN58241.1
PFAM: protein of unknown function DUF328; KEGG: bpy:Bphyt_1375 hypothetical protein; Belongs to the UPF0246 family.
  
    0.733
ADN60920.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bac:BamMC406_6131 LysR family transcriptional regulator.
 
     0.620
ADN59351.1
KEGG: bph:Bphy_2037 copper resistance D domain-containing protein.
  
     0.607
ADN61677.1
KEGG: bcj:BCAS0666 putative ankyrin-repeat exported protein.
 
     0.553
ADN60639.1
KEGG: bpy:Bphyt_6987 phospholipase D/transphosphatidylase.
 
     0.500
ADN61657.1
KEGG: bpy:Bphyt_4922 type VI secretion-associated protein, BMA_A0400 family; TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: Type VI secretion system-associated, BMAA0400.
  
     0.497
ADN61646.1
TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: bpy:Bphyt_4911 type VI secretion lipoprotein, VC_A0113 family.
  
     0.493
ADN61404.1
PFAM: Tannase and feruloyl esterase; KEGG: bpy:Bphyt_4018 feruloyl esterase.
  
     0.472
ADN61403.1
PFAM: porin Gram-negative type; KEGG: porin gram-negative type.
  
     0.462
ADN61721.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_A2994 TonB-dependent receptor.
  
     0.453
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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