STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN61148.1PFAM: metallophosphoesterase; KEGG: bpy:Bphyt_4459 metallophosphoesterase. (220 aa)    
Predicted Functional Partners:
ADN61149.1
DEAD/H associated domain protein; KEGG: bxe:Bxe_B0778 putative DEAD/DEAH box helicase; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
 
    0.958
ADN59647.1
PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bxe:Bxe_B1315 ATP-dependent DNA ligase.
 
   
 0.841
ADN59648.1
KEGG: bxe:Bxe_B1314 putative exonuclease involved in mRNA processing.
 
     0.809
ADN57539.1
KEGG: bpy:Bphyt_1858 DNA ligase D; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit.
 
   
 0.499
ADN61150.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bpy:Bphyt_4461 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.485
icmF
methylmalonyl-CoA mutase, large subunit; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
      
 0.400
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
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