STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yofAPFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: enc:ECL_00178 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (321 aa)    
Predicted Functional Partners:
AEN63595.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vpe:Varpa_2322 transcriptional regulator LysR family.
  
     0.726
yhjC
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_01916 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.692
ycaN
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rah:Rahaq_1637 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.620
gcvA_1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cko:CKO_02932 hypothetical protein.
  
     0.602
mipA_2
PFAM: MltA-interacting MipA; KEGG: enc:ECL_00179 hypothetical protein.
 
     0.598
yeeY_1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_03337 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.577
yahB
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ent:Ent638_3146 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
   
 0.571
AEN65861.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ent:Ent638_2932 DNA-binding transcriptional activator XapR.
  
     0.570
abgR_2
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_04512 DNA-binding transcriptional activator TdcA.
  
     0.541
abgR_1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: enc:ECL_02254 transcriptional regulator AbgR; Belongs to the LysR transcriptional regulatory family.
  
     0.524
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.