Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yhjX_2KEGG: enc:ECL_00226 oxalate/formate antiporter; TIGRFAM: Oxalate/formate antiporter; PFAM: Major facilitator superfamily MFS-1. (400 aa)    
Predicted Functional Partners:
norW_1
KEGG: enc:ECL_01616 nitrite reductase (NAD(P)H) large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Nitrite/sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like.
  
 
 0.769
ypdA_2
Signal transduction histidine kinase, LytS; KEGG: enc:ECL_03724 putative sensory kinase in two-component system; PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; GAF; ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like.
 
   
 0.631
AEN64972.1
KEGG: enc:ECL_01893 nitrate reductase 2, alpha subunit; TIGRFAM: Nitrate reductase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region.
  
 
 0.578
narG_7
KEGG: enc:ECL_01622 nitrate reductase 1, alpha subunit; TIGRFAM: Nitrate reductase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region.
  
 
 0.578
fccA
TIGRFAM: Flavocytochrome c; KEGG: enc:ECL_03250 flavocytochrome c; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; NADH:flavin oxidoreductase/NADH oxidase, N-terminal.
 
   
 0.575
mrkE
Two component transcriptional regulator, LytTR family; KEGG: enc:ECL_03725 putative response regulator in two-component system; PFAM: Signal transduction response regulator, receiver region; LytTr DNA-binding region; SMART: Signal transduction response regulator, receiver region.
 
   
 0.563
yehU_1
KEGG: enc:ECL_03436 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region; GAF; ATP-binding region, ATPase-like; SMART: GAF; ATP-binding region, ATPase-like.
 
   
 0.481
AEN64973.1
TIGRFAM: Nitrate reductase, beta subunit; KEGG: ent:Ent638_2063 respiratory nitrate reductase beta subunit.
  
 
 0.465
narH_1
TIGRFAM: Nitrate reductase, beta subunit; KEGG: ent:Ent638_2314 respiratory nitrate reductase beta subunit.
  
 
 0.465
AEN64975.1
KEGG: kpu:KP1_2949 cryptic nitrate reductase 2 gamma subunit; TIGRFAM: Nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit.
  
 
 0.457
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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