STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actP_1TIGRFAM: Cation/acetate symporter ActP; Sodium/solute symporter, subgroup; HAMAP: Cation/acetate symporter ActP; KEGG: enc:ECL_00328 hypothetical protein; PFAM: Sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (549 aa)    
Predicted Functional Partners:
yjcH
PFAM: Protein of unknown function DUF485; KEGG: enc:ECL_00329 putative inner membrane protein.
 
  
 0.997
acs_2
TIGRFAM: Acetate--CoA ligase; HAMAP: Acetyl-coenzyme A synthetase; KEGG: enc:ECL_00330 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase.
  
  
 0.915
fadB_2
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.596
gltA_2
KEGG: enc:ECL_03012 citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like.
  
  
 0.507
kdsD
KpsF/GutQ family protein; KEGG: enc:ECL_04579 D-arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core.
  
  
 0.492
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.456
maeB_2
PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; KEGG: enc:ECL_03760 malic enzyme.
   
  
 0.447
Your Current Organism:
Enterobacter asburiae
NCBI taxonomy Id: 640513
Other names: E. asburiae LF7a, Enterobacter asburiae LF7a, Enterobacter asburiae str. LF7a, Enterobacter asburiae strain LF7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.